STRINGSTRING
Solyc01g110390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110390.2.1Uncharacterized protein (119 aa)    
Predicted Functional Partners:
Solyc01g022750.2.1
Uncharacterized protein (132 aa)
     
  0.998
Solyc12g036790.1.1
Uncharacterized protein (121 aa)
     
  0.997
Solyc04g008490.1.1
Uncharacterized protein (100 aa)
     
    0.991
Solyc06g036350.2.1
Uncharacterized protein (175 aa)
     
  0.990
Solyc03g007660.2.1
Uncharacterized protein (174 aa)
     
  0.990
Solyc08g080240.2.1
Uncharacterized protein (105 aa)
     
  0.987
Solyc00g042140.1.1
Annotation not available (399 aa)
     
 
  0.986
Solyc11g012180.1.1
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (133 aa)
     
  0.986
Solyc06g054510.2.1
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (136 aa)
     
  0.986
Solyc05g056240.2.1
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (131 aa)
     
  0.986
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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