STRINGSTRING
Solyc01g110410.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110410.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110410.2.1Uncharacterized protein (317 aa)    
Predicted Functional Partners:
Solyc06g084440.2.1
Uncharacterized protein (411 aa)
     
  0.997
Solyc12g007100.1.1
Uncharacterized protein (483 aa)
     
  0.977
Solyc07g023990.1.1
Uncharacterized protein (416 aa)
     
  0.977
Solyc11g069720.1.1
Uncharacterized protein (805 aa)
     
  0.976
Solyc10g084050.1.1
Uncharacterized protein (808 aa)
     
  0.976
Solyc09g008070.2.1
Uncharacterized protein (808 aa)
     
  0.976
Solyc06g074980.2.1
Uncharacterized protein (805 aa)
     
  0.976
Solyc05g012190.2.1
Uncharacterized protein (611 aa)
     
  0.976
Solyc03g112590.2.1
Uncharacterized protein (831 aa)
     
  0.976
Solyc02g036330.2.1
Uncharacterized protein (202 aa)
     
  0.976
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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