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STRINGSTRING
101254139 protein (Solanum lycopersicum) - STRING interaction network
"101254139" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101254139annotation not available (53 aa)    
Predicted Functional Partners:
Solyc08g006420.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Prefoldin (InterPro-IPR009053); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species- Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fu /.../17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source- NCBI BLink) (2617 aa)
       
 
  0.928
Solyc03g034080.2.1
Leucine-rich repeat (LRR) family protein (478 aa)
           
  0.853
TKR
Kinesin related protein ; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1191 aa)
           
  0.803
101258595
annotation not available (1403 aa)
           
  0.697
101248612
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (1102 aa)
           
  0.697
Solyc00g006900.1.1
annotation not available (161 aa)
           
  0.697
101261294
Auxin transport protein (BIG) (5104 aa)
           
  0.669
101247244
annotation not available (62 aa)
     
   
  0.659
Solyc08g076340.2.1
annotation not available (62 aa)
     
   
  0.659
Solyc04g072270.1.1
annotation not available (404 aa)
           
  0.648
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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