STRINGSTRING
Solyc01g110550.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110550.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110550.2.1Uncharacterized protein (221 aa)    
Predicted Functional Partners:
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
   
   
  0.659
Solyc08g081900.2.1
Uncharacterized protein (736 aa)
   
   
  0.657
Solyc07g056020.2.1
Uncharacterized protein (1010 aa)
   
   
  0.657
Solyc06g054400.2.1
Uncharacterized protein (1141 aa)
   
   
  0.657
Solyc03g058380.2.1
Uncharacterized protein (761 aa)
   
   
  0.657
Solyc03g058350.2.1
Uncharacterized protein (1156 aa)
   
   
  0.657
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
   
   
  0.617
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
   
   
  0.617
Solyc02g093460.2.1
Uncharacterized protein (539 aa)
   
   
  0.562
Solyc02g081810.2.1
Uncharacterized protein (597 aa)
   
   
  0.562
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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