STRINGSTRING
Solyc01g110820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110820.2.1Uncharacterized protein (448 aa)    
Predicted Functional Partners:
Solyc09g098390.2.1
Uncharacterized protein (355 aa)
         
  0.763
Solyc04g050760.2.1
Uncharacterized protein (719 aa)
     
   
  0.536
Solyc02g085420.2.1
Uncharacterized protein (478 aa)
         
  0.534
Solyc12g099400.1.1
Uncharacterized protein (309 aa)
           
  0.534
Solyc01g095230.2.1
Uncharacterized protein (411 aa)
           
  0.533
Solyc03g006520.2.1
Uncharacterized protein (591 aa)
     
 
    0.527
Solyc02g078610.2.1
Uncharacterized protein (586 aa)
     
 
    0.527
pi2
Peptidyl-prolyl cis-trans isomerase CYP95 (809 aa)
           
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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