STRINGSTRING
Solyc01g110990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110990.2.1Uncharacterized protein (1111 aa)    
Predicted Functional Partners:
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.992
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.991
Solyc07g008880.2.1
Uncharacterized protein (2384 aa)
     
  0.981
Solyc06g043160.1.1
Uncharacterized protein (52 aa)
     
  0.981
Solyc06g036580.2.1
Uncharacterized protein (633 aa)
     
  0.979
Solyc05g054880.2.1
Uncharacterized protein (549 aa)
     
  0.979
Solyc08g068120.1.1
Uncharacterized protein (1451 aa)
   
  0.979
Solyc04g081580.2.1
Uncharacterized protein (744 aa)
   
  0.976
Solyc05g051070.2.1
Uncharacterized protein (310 aa)
     
  0.976
Solyc09g072570.2.1
Uncharacterized protein (536 aa)
     
  0.975
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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