STRINGSTRING
Solyc01g111870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g111870.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g111870.1.1Uncharacterized protein (2728 aa)    
Predicted Functional Partners:
Solyc08g077990.2.1
Uncharacterized protein (1016 aa)
     
  0.984
Solyc02g083600.2.1
Uncharacterized protein (599 aa)
     
  0.984
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
     
  0.979
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
  0.977
Solyc06g034070.1.1
Uncharacterized protein (1557 aa)
     
  0.977
Solyc06g071490.1.1
Uncharacterized protein (1135 aa)
     
  0.976
Solyc03g112940.2.1
Uncharacterized protein (1490 aa)
     
  0.976
Solyc05g053800.2.1
Uncharacterized protein (1316 aa)
     
  0.976
Solyc06g009680.2.1
Uncharacterized protein (1237 aa)
     
  0.976
Solyc01g068260.2.1
Uncharacterized protein (983 aa)
     
  0.976
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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