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STRINGSTRING
101250060 protein (Solanum lycopersicum) - STRING interaction network
"101250060" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101250060Uncharacterized protein; COSII_At1g16210 (231 aa)    
Predicted Functional Partners:
101255357
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (222 aa)
       
      0.857
101267617
annotation not available (444 aa)
     
        0.848
101256968
Protein phosphatase 2C family protein (353 aa)
           
  0.773
101255084
Uncharacterized protein; NADH-ubiquinone oxidoreductase B18 subunit, putative (100 aa)
     
        0.772
Solyc07g008270.2.1
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (87 aa)
     
        0.740
101261916
AP complex subunit sigma; SNARE-like superfamily protein; Belongs to the adaptor complexes small subunit family (142 aa)
     
        0.735
Solyc04g074090.2.1
Uncharacterized protein; Binding (892 aa)
     
        0.722
101255438
Uncharacterized protein; PTEN 2 (619 aa)
           
  0.696
101258291
Uncharacterized protein; Translocase of the inner mitochondrial membrane 13; Belongs to the small Tim family (88 aa)
     
        0.683
101262474
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
     
   
  0.664
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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