STRINGSTRING
Solyc01g112170.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g112170.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g112170.2.1Uncharacterized protein (169 aa)    
Predicted Functional Partners:
Solyc12g100360.1.1
Uncharacterized protein (2104 aa)
       
  0.866
Solyc12g100350.1.1
Uncharacterized protein (45 aa)
       
  0.866
Solyc05g008430.2.1
Uncharacterized protein (888 aa)
       
 
  0.765
Solyc04g007560.2.1
Uncharacterized protein (908 aa)
       
 
  0.765
Solyc07g061800.2.1
Uncharacterized protein (222 aa)
       
      0.573
Solyc07g061790.2.1
Uncharacterized protein (229 aa)
       
      0.573
Solyc02g065630.2.1
Uncharacterized protein (442 aa)
       
      0.570
Solyc03g112650.2.1
Uncharacterized protein (222 aa)
       
      0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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