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STRINGSTRING
101255542 protein (Solanum lycopersicum) - STRING interaction network
"101255542" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101255542annotation not available (169 aa)    
Predicted Functional Partners:
101261454
annotation not available (1124 aa)
       
 
  0.886
Solyc05g008430.2.1
annotation not available (888 aa)
     
 
  0.748
101245450
annotation not available (908 aa)
     
 
  0.748
Solyc12g100360.1.1
Uncharacterized protein; Calpain-type cysteine protease family; Belongs to the peptidase C2 family (2104 aa)
       
 
  0.580
Solyc12g100350.1.1
annotation not available (45 aa)
       
 
  0.580
101246277
annotation not available (731 aa)
           
  0.568
101265816
annotation not available (173 aa)
     
   
  0.556
101244728
annotation not available (168 aa)
     
   
  0.556
101255058
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species- Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryo /.../1370 (source- NCBI BLink) (442 aa)
       
      0.540
101261916
AP complex subunit sigma; SNARE-like superfamily protein; Belongs to the adaptor complexes small subunit family (142 aa)
     
   
  0.457
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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