STRINGSTRING
Solyc02g005200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g005200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g005200.2.1Uncharacterized protein (365 aa)    
Predicted Functional Partners:
Solyc08g008270.2.1
Uncharacterized protein (178 aa)
   
        0.663
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.658
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
        0.595
Solyc02g090030.2.1
Oxygen-evolving enhancer protein 1, chloroplastic (333 aa)
   
        0.591
PSBO
Oxygen-evolving enhancer protein 1, chloroplastic ; Stabilizes the manganese cluster which is the primary site of water splitting (329 aa)
   
        0.590
Solyc01g098990.2.1
Uncharacterized protein (308 aa)
   
        0.584
Solyc02g069460.2.1
Uncharacterized protein (228 aa)
   
   
  0.569
Solyc02g069450.2.1
Uncharacterized protein (246 aa)
   
   
  0.568
Solyc06g065990.1.1
Uncharacterized protein (223 aa)
   
        0.560
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
        0.552
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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