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STRINGSTRING
Solyc02g010600.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g010600.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g010600.1.1annotation not available (142 aa)    
Predicted Functional Partners:
rps16
30S ribosomal protein S16 (132 aa)
   
 
  0.986
Solyc07g008270.2.1
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (87 aa)
   
 
  0.981
101256642
Ribosomal protein L23/L15e family protein (188 aa)
     
 
  0.979
Solyc04g014390.2.1
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein (175 aa)
     
      0.945
101245574
annotation not available (214 aa)
     
 
  0.942
100037517
Putative L19 ribosomal protein (250 aa)
     
 
  0.942
101251434
Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family (502 aa)
   
 
  0.941
101256335
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family (385 aa)
   
 
  0.940
Solyc04g079790.2.1
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (237 aa)
   
 
  0.940
Solyc11g010180.1.1
annotation not available (215 aa)
     
 
  0.937
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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