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Solyc02g011990.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g011990.1.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
Solyc02g011990.1.1Uncharacterized protein (261 aa)    
Predicted Functional Partners:
psbB
Photosystem II CP47 chlorophyll apoprotein ; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light-induced photochemical processes of PSII. PSII is a light- driven water-plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation (553 aa)
   
 
  0.988
psbH
Photosystem II reaction center protein H ; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (73 aa)
   
 
  0.976
Solyc01g011480.1.1
Uncharacterized protein (85 aa)
   
 
  0.976
Solyc10g017940.1.1
Uncharacterized protein (200 aa)
   
 
  0.975
Solyc10g047410.1.1
Uncharacterized protein (298 aa)
   
 
  0.975
Solyc01g044250.1.1
Uncharacterized protein (73 aa)
   
 
  0.973
psbF
Cytochrome b559 subunit beta ; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water-plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation (39 aa)
   
 
  0.903
psbI
Photosystem II reaction center protein I (77 aa)
     
 
  0.898
psbM
Photosystem II reaction center protein M (62 aa)
       
 
  0.866
Solyc07g021240.1.1
Uncharacterized protein (169 aa)
   
   
  0.751
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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