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STRINGSTRING
Solyc02g012000.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g012000.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g012000.1.1annotation not available (106 aa)    
Predicted Functional Partners:
Solyc00g042140.1.1
annotation not available (399 aa)
 
 
  0.995
atpB
ATP synthase subunit beta, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family (609 aa)
 
 
  0.995
Solyc07g021380.1.1
annotation not available (121 aa)
   
 
  0.971
101257833
ATPase, F1 complex, gamma subunit protein (349 aa)
 
 
  0.950
Solyc12g062630.1.1
annotation not available (134 aa)
   
 
  0.949
101260525
Uncharacterized protein; Gamma subunit of Mt ATP synthase (324 aa)
 
 
  0.949
101253342
ATPase, F1 complex, gamma subunit protein (377 aa)
 
 
  0.947
101254882
Uncharacterized protein; ATP synthase delta-subunit gene (250 aa)
   
 
  0.924
Solyc05g050500.1.1
ATPase, F1 complex, OSCP/delta subunit protein (241 aa)
   
 
  0.924
101244808
Uncharacterized protein; Delta subunit of Mt ATP synthase (239 aa)
   
 
  0.924
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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