STRINGSTRING
Solyc02g014150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g014150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g014150.2.1Uncharacterized protein (377 aa)    
Predicted Functional Partners:
Solyc02g086910.2.1
Uncharacterized protein (451 aa)
   
   
  0.598
Solyc07g054290.1.1
Uncharacterized protein (197 aa)
   
   
  0.549
Solyc03g114930.2.1
Uncharacterized protein (246 aa)
   
   
  0.523
Solyc01g095000.2.1
Uncharacterized protein (245 aa)
   
          0.515
Solyc04g009420.2.1
Uncharacterized protein (244 aa)
   
        0.495
Solyc09g065300.2.1
Uncharacterized protein (209 aa)
   
        0.490
Solyc09g018890.2.1
Uncharacterized protein (185 aa)
   
        0.489
Solyc09g064500.2.1
Photosystem II reaction center Psb28 protein (180 aa)
   
   
  0.483
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.483
Solyc08g007040.2.1
Uncharacterized protein (161 aa)
     
   
  0.479
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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