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STRINGSTRING
Solyc02g014450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g014450.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g014450.1.1annotation not available (726 aa)    
Predicted Functional Partners:
101249720
Vacuolar protein sorting-associated protein 29; Calcineurin-like metallo-phosphoesterase superfamily protein; Belongs to the VPS29 family (189 aa)
       
 
  0.951
101247715
annotation not available (301 aa)
     
 
  0.937
101250078
ARM repeat superfamily protein (674 aa)
           
  0.834
101264178
ARM repeat superfamily protein (1161 aa)
           
  0.684
101255401
annotation not available (207 aa)
     
 
  0.671
101262189
annotation not available (207 aa)
     
 
  0.671
101245584
Ras-related small GTP-binding family protein (208 aa)
     
 
  0.671
101267189
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 25 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function /.../83, C-terminal (InterPro-IPR012880), Foie gras liver health family 1 (InterPro-IPR021773); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (1176 aa)
     
 
  0.664
101246624
Protein of Unknown Function (DUF239) (433 aa)
           
  0.664
101249253
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting (791 aa)
     
 
  0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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