• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc02g014830.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g014830.2.1" - Serine carboxypeptidase-like 34 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g014830.2.1Serine carboxypeptidase-like 34; Belongs to the peptidase S10 family (470 aa)    
Predicted Functional Partners:
Solyc03g045020.2.1
annotation not available (374 aa)
     
   
  0.622
Solyc03g044120.1.1
annotation not available (476 aa)
     
   
  0.622
101245324
Uncharacterized protein; Transmembrane amino acid transporter family protein (454 aa)
           
  0.595
Solyc03g071840.1.1
annotation not available (151 aa)
           
  0.595
Solyc09g064430.2.1
annotation not available (468 aa)
     
   
  0.550
101263768
annotation not available (594 aa)
           
  0.549
101263538
annotation not available (591 aa)
           
  0.549
101257685
annotation not available (600 aa)
           
  0.549
Solyc01g080870.2.1
annotation not available (600 aa)
           
  0.549
101266857
Major facilitator superfamily protein (598 aa)
           
  0.437
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]