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STRINGSTRING
101255042 protein (Solanum lycopersicum) - STRING interaction network
"101255042" - Protein of unknown function in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101255042Protein of unknown function (DUF177) (298 aa)    
Predicted Functional Partners:
101246579
Protein of unknown function (DUF177) (219 aa)
     
   
  0.956
101264624
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species- Archae /.../Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (170 aa)
     
        0.871
101245909
Uncharacterized protein; RNA binding;GTP binding; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (438 aa)
     
        0.868
101254999
Plastid-specific ribosomal protein 4 (121 aa)
     
        0.862
101245558
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (1048 aa)
     
        0.858
101262888
Ribosomal protein L9 (192 aa)
     
        0.854
101259181
annotation not available (217 aa)
     
        0.847
Solyc11g044360.1.1
Uncharacterized protein; Mitochondrial transcription termination factor family protein (317 aa)
     
        0.845
101252524
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (545 aa)
     
        0.834
101250874
Ribosomal L18p/L5e family protein (162 aa)
     
        0.830
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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