• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101258013 protein (Solanum lycopersicum) - STRING interaction network
"101258013" - Protein of unknown function in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258013Protein of unknown function (DUF833) (272 aa)    
Predicted Functional Partners:
Solyc06g060810.2.1
Uncharacterized protein; Undecaprenyl pyrophosphate synthetase family protein (236 aa)
           
  0.654
101248592
Uncharacterized protein; Ubiquitin fusion degradation UFD1 family protein (569 aa)
           
  0.613
101252322
Uncharacterized protein; Catalytics (982 aa)
           
  0.608
101248524
annotation not available (317 aa)
           
  0.582
Solyc10g085220.1.1
annotation not available (848 aa)
           
  0.581
101264013
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G10660.1); Has 35333 Blast hits to 34131 protei /.../2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (302 aa)
           
  0.581
Solyc02g083380.2.1
Unknown protein; Has 39 Blast hits to 39 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (72 aa)
           
  0.581
101256158
Zinc finger (CCCH-type) family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (921 aa)
           
  0.569
101249444
RNA methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (569 aa)
           
  0.569
101249010
Uncharacterized protein; Cell division cycle 45 (595 aa)
           
  0.551
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]