STRINGSTRING
Solyc02g021620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g021620.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g021620.2.1Uncharacterized protein (988 aa)    
Predicted Functional Partners:
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
     
 
  0.941
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
     
 
  0.941
Solyc11g069690.1.1
Uncharacterized protein (125 aa)
       
 
  0.730
Solyc05g051900.2.1
Uncharacterized protein (483 aa)
     
 
  0.728
Solyc05g054260.2.1
Kinesin-like protein (808 aa)
     
   
  0.716
Solyc09g091070.1.1
Malate dehydrogenase (298 aa)
     
   
  0.714
Solyc12g049500.1.1
Uncharacterized protein (508 aa)
           
  0.699
Solyc09g098450.2.1
Uncharacterized protein (789 aa)
           
  0.699
Solyc09g090940.2.1
Uncharacterized protein (468 aa)
           
  0.699
Solyc08g081990.2.1
Uncharacterized protein (1052 aa)
           
  0.699
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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