Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cullin-4 | DDB1 | Solyc02g070460.2.1 | Solyc02g021650.2.1 | Uncharacterized protein; Belongs to the cullin family | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | 0.995 |
| Cullin-4 | Det1 | Solyc02g070460.2.1 | Solyc01g056340.2.1 | Uncharacterized protein; Belongs to the cullin family | Light-mediated development protein DET1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5; Belongs to the DET1 family | 0.958 |
| Cullin-4 | Solyc01g021640.2.1 | Solyc02g070460.2.1 | Solyc01g021640.2.1 | Uncharacterized protein; Belongs to the cullin family | Uncharacterized protein loc101252105 isoform x1; Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein | 0.958 |
| Cullin-4 | Solyc02g086470.2.1 | Solyc02g070460.2.1 | Solyc02g086470.2.1 | Uncharacterized protein; Belongs to the cullin family | Denticleless protein homolog a; Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein | 0.992 |
| Cullin-4 | Solyc04g080160.2.1 | Solyc02g070460.2.1 | Solyc04g080160.2.1 | Uncharacterized protein; Belongs to the cullin family | COP9 signalosome complex subunit 4; Proteasome component (PCI) domain protein | 0.990 |
| Cullin-4 | Solyc08g008120.2.1 | Solyc02g070460.2.1 | Solyc08g008120.2.1 | Uncharacterized protein; Belongs to the cullin family | Uncharacterized protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (In /.../:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink) | 0.977 |
| Cullin-4 | Solyc08g074370.2.1 | Solyc02g070460.2.1 | Solyc08g074370.2.1 | Uncharacterized protein; Belongs to the cullin family | DDB1- and CUL4-associated factor homolog 1; Uncharacterized protein; DDB1-CUL4 associated factor 1 | 0.974 |
| Cullin-4 | Solyc09g031610.2.1 | Solyc02g070460.2.1 | Solyc09g031610.2.1 | Uncharacterized protein; Belongs to the cullin family | Protein damaged dna-binding 2; Uncharacterized protein; Damaged DNA binding 2 | 0.974 |
| Cullin-4 | Solyc12g088340.1.1 | Solyc02g070460.2.1 | Solyc12g088340.1.1 | Uncharacterized protein; Belongs to the cullin family | annotation not available | 0.988 |
| Cullin-4 | cul4 | Solyc02g070460.2.1 | Solyc02g021470.2.1 | Uncharacterized protein; Belongs to the cullin family | Uncharacterized protein; Cullin 4 ; Belongs to the cullin family | 0.800 |
| DDB1 | Cullin-4 | Solyc02g021650.2.1 | Solyc02g070460.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Uncharacterized protein; Belongs to the cullin family | 0.995 |
| DDB1 | Det1 | Solyc02g021650.2.1 | Solyc01g056340.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Light-mediated development protein DET1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5; Belongs to the DET1 family | 0.998 |
| DDB1 | Solyc01g021640.2.1 | Solyc02g021650.2.1 | Solyc01g021640.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Uncharacterized protein loc101252105 isoform x1; Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein | 0.994 |
| DDB1 | Solyc02g086470.2.1 | Solyc02g021650.2.1 | Solyc02g086470.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Denticleless protein homolog a; Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein | 0.997 |
| DDB1 | Solyc04g080160.2.1 | Solyc02g021650.2.1 | Solyc04g080160.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | COP9 signalosome complex subunit 4; Proteasome component (PCI) domain protein | 0.995 |
| DDB1 | Solyc08g008120.2.1 | Solyc02g021650.2.1 | Solyc08g008120.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Uncharacterized protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase, Det1/DDB1-complexing (In /.../:IPR018276); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink) | 0.999 |
| DDB1 | Solyc08g074370.2.1 | Solyc02g021650.2.1 | Solyc08g074370.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | DDB1- and CUL4-associated factor homolog 1; Uncharacterized protein; DDB1-CUL4 associated factor 1 | 0.996 |
| DDB1 | Solyc09g031610.2.1 | Solyc02g021650.2.1 | Solyc09g031610.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Protein damaged dna-binding 2; Uncharacterized protein; Damaged DNA binding 2 | 0.998 |
| DDB1 | Solyc12g088340.1.1 | Solyc02g021650.2.1 | Solyc12g088340.1.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | annotation not available | 0.997 |
| DDB1 | cul4 | Solyc02g021650.2.1 | Solyc02g021470.2.1 | DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 | Uncharacterized protein; Cullin 4 ; Belongs to the cullin family | 0.999 |
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