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STRINGSTRING
101256819 protein (Solanum lycopersicum) - STRING interaction network
"101256819" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256819annotation not available (338 aa)    
Predicted Functional Partners:
101256871
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (360 aa)
           
  0.685
Solyc10g086640.1.1
annotation not available (258 aa)
           
  0.675
101245390
annotation not available (504 aa)
           
  0.675
Solyc09g008830.2.1
Uncharacterized protein; Sequence-specific DNA binding transcription factors (236 aa)
           
  0.658
101246236
Elongator complex protein 3; Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (565 aa)
           
  0.595
101264463
annotation not available (555 aa)
           
  0.592
Solyc11g069890.1.1
Uncharacterized protein; BEL1-like homeodomain 8 (580 aa)
           
  0.561
101252608
annotation not available (333 aa)
           
  0.548
Solyc08g008000.1.1
annotation not available (600 aa)
           
  0.548
101264297
annotation not available (447 aa)
           
  0.536
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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