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STRINGSTRING
101253542 protein (Solanum lycopersicum) - STRING interaction network
"101253542" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253542annotation not available (446 aa)    
Predicted Functional Partners:
101257133
annotation not available (447 aa)
     
 
  0.944
Solyc01g079210.2.1
Myb-like transcription factor family protein (451 aa)
     
 
  0.943
101252527
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- vacuole; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Histone H4 acetyltransferase, NuA4 complex, Ea /.../terPro-IPR015418); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (157 aa)
     
 
  0.936
101252026
annotation not available (144 aa)
     
 
  0.936
Solyc04g078400.2.1
MRG family protein (298 aa)
       
 
  0.915
101249778
MRG family protein (317 aa)
       
 
  0.915
TRRAP
annotation not available (3913 aa)
     
 
  0.899
Solyc02g083780.1.1
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (997 aa)
     
 
  0.899
101245213
PHD finger protein-related (258 aa)
     
 
  0.895
101251224
RING/FYVE/PHD zinc finger superfamily protein (236 aa)
     
 
  0.895
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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