STRINGSTRING
Solyc02g032970.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g032970.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g032970.2.1Uncharacterized protein (229 aa)    
Predicted Functional Partners:
Solyc12g005500.1.1
Uncharacterized protein (283 aa)
     
 
  0.766
Solyc10g008140.2.1
Uncharacterized protein (289 aa)
     
 
  0.766
Solyc11g013260.1.1
Uncharacterized protein (301 aa)
     
 
  0.746
Solyc11g010190.1.1
Uncharacterized protein (279 aa)
     
 
  0.746
Solyc05g051510.2.1
Uncharacterized protein (277 aa)
     
 
  0.746
Solyc00g042130.1.1
Annotation not available (704 aa)
     
 
  0.744
LOC543882
Putative FtsH protease (714 aa)
     
 
  0.726
Solyc08g063050.2.1
Uncharacterized protein (716 aa)
     
 
  0.726
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.689
Solyc00g042140.1.1
Annotation not available (399 aa)
     
  0.682
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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