STRINGSTRING
Solyc02g044000.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g044000.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g044000.1.1Uncharacterized protein (603 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.781
Solyc03g007800.2.1
Uncharacterized protein (1294 aa)
     
 
  0.753
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.690
Solyc01g088380.1.1
Uncharacterized protein (1428 aa)
     
 
  0.638
Solyc00g029080.1.1
Annotation not available (956 aa)
     
 
  0.638
Solyc10g081250.1.1
DNA polymerase (1086 aa)
     
 
  0.576
Solyc11g073220.1.1
Uncharacterized protein (311 aa)
     
 
  0.563
Solyc11g072610.1.1
Uncharacterized protein (371 aa)
     
 
  0.563
Solyc10g079250.1.1
Putative recA protein (395 aa)
     
 
  0.563
Solyc07g066320.2.1
Uncharacterized protein (419 aa)
     
 
  0.563
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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