STRINGSTRING
Solyc02g044040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g044040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g044040.1.1Uncharacterized protein (250 aa)    
Predicted Functional Partners:
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
   
  0.956
Solyc11g064920.1.1
Uncharacterized protein (534 aa)
 
  0.955
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
  0.948
Solyc10g081440.1.1
NADH-cytochrome b5 reductase (278 aa)
     
  0.943
Solyc05g018520.2.1
NADH-cytochrome b5 reductase (323 aa)
     
  0.943
Solyc05g008450.2.1
Uncharacterized protein (302 aa)
     
  0.943
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
  0.940
Solyc02g078400.2.1
Uncharacterized protein (503 aa)
 
  0.927
Solyc01g102490.2.1
Uncharacterized protein (391 aa)
   
  0.900
Solyc11g006350.1.1
Aspartate carbamoyltransferase (377 aa)
   
 
  0.874
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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