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STRINGSTRING
Solyc02g050210.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g050210.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g050210.1.1annotation not available (355 aa)    
Predicted Functional Partners:
RAD51
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA (By similarity) (342 aa)
     
 
  0.910
Solyc11g073220.1.1
Uncharacterized protein; Homolog of RAD51 D (311 aa)
     
 
  0.909
101256634
Uncharacterized protein; Ataxia telangiectasia-mutated and RAD3-related (2728 aa)
     
 
  0.903
101253055
DNA repair (Rad51) family protein (371 aa)
     
 
  0.903
101263651
Putative recA protein ; Belongs to the RecA family (395 aa)
     
 
  0.903
101261637
recA DNA recombination family protein; Belongs to the RecA family (419 aa)
     
 
  0.903
101260233
annotation not available (418 aa)
     
 
  0.903
101245268
Uncharacterized protein; Homolog of X-ray repair cross complementing 3 (XRCC3) (285 aa)
     
 
  0.886
Solyc01g097110.1.1
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 14 plant structures; EXPRESSED DURING- 6 growth stages; Has 257 Blast hits to 164 proteins in 70 species- Arch /.../; Bacteria - 4; Metazoa - 189; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26 (source- NCBI BLink) (1500 aa)
     
 
  0.856
Solyc09g082790.2.1
DNA repair (Rad51) family protein; Belongs to the RecA family (334 aa)
     
 
  0.805
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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