STRINGSTRING
Solyc02g060570.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g060570.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g060570.1.1Uncharacterized protein (709 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.984
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
  0.979
Solyc03g033430.1.1
Uncharacterized protein (170 aa)
     
  0.961
Solyc02g083710.2.1
Uncharacterized protein (403 aa)
     
  0.961
UBI3
Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin tha [...] (156 aa)
     
  0.956
Solyc06g074770.2.1
Uncharacterized protein (925 aa)
     
  0.950
Solyc02g088550.2.1
Uncharacterized protein (512 aa)
     
  0.950
Solyc07g017400.2.1
Uncharacterized protein (321 aa)
     
 
  0.937
Solyc04g082410.2.1
Uncharacterized protein (322 aa)
       
  0.935
Solyc04g007120.2.1
Uncharacterized protein (409 aa)
     
 
  0.928
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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