STRINGSTRING
Solyc02g061790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g061790.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g061790.2.1Uncharacterized protein (103 aa)    
Predicted Functional Partners:
Solyc09g005340.2.1
Uncharacterized protein (487 aa)
       
 
  0.847
Solyc09g005330.2.1
Uncharacterized protein (893 aa)
       
 
  0.847
Solyc04g076910.2.1
Uncharacterized protein (1150 aa)
       
 
  0.847
Solyc04g076900.1.1
Uncharacterized protein (247 aa)
       
 
  0.847
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
       
      0.802
Solyc11g008150.1.1
Uncharacterized protein (1509 aa)
       
 
  0.701
Solyc04g064700.2.1
Transcription elongation factor SPT5 (1040 aa)
       
 
  0.701
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
 
  0.610
Solyc06g068280.2.1
Uncharacterized protein (595 aa)
       
      0.604
Solyc03g117440.2.1
Uncharacterized protein (595 aa)
       
      0.604
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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