STRINGSTRING
Solyc02g062540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g062540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g062540.2.1Uncharacterized protein (228 aa)    
Predicted Functional Partners:
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
 
  0.963
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
 
  0.960
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
   
  0.860
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
   
  0.860
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
   
  0.860
CCT3
T-complex protein 1 subunit gamma; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (557 aa)
   
 
  0.839
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
 
  0.800
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
 
  0.800
Solyc03g032000.2.1
Thioredoxin reductase (328 aa)
   
 
  0.800
Solyc02g082250.2.1
Thioredoxin reductase (367 aa)
   
 
  0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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