STRINGSTRING
Solyc02g062600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g062600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g062600.2.1Uncharacterized protein (268 aa)    
Predicted Functional Partners:
Solyc07g017500.2.1
Uncharacterized protein (485 aa)
       
      0.800
Solyc11g007120.1.1
Uncharacterized protein (278 aa)
     
      0.733
Solyc09g010970.2.1
Carbonate dehydratase ; Reversible hydration of carbon dioxide (281 aa)
     
 
  0.707
ca1
Carbonic anhydrase ; Reversible hydration of carbon dioxide (268 aa)
     
 
  0.707
ca2
Carbonic anhydrase ; Reversible hydration of carbon dioxide (321 aa)
     
 
  0.707
ca3
Carbonic anhydrase ; Reversible hydration of carbon dioxide (255 aa)
     
 
  0.707
Solyc08g078220.2.1
Uncharacterized protein (221 aa)
       
 
  0.611
Solyc03g008010.2.1
Uncharacterized protein (237 aa)
       
 
  0.611
Solyc12g062560.1.1
Uncharacterized protein (112 aa)
       
 
  0.610
Solyc12g062550.1.1
Uncharacterized protein (102 aa)
       
 
  0.610
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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