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STRINGSTRING
101268836 protein (Solanum lycopersicum) - STRING interaction network
"101268836" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268836annotation not available (372 aa)    
Predicted Functional Partners:
101266539
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species- Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (so /.../NCBI BLink) (268 aa)
     
        0.870
101266362
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF3493 (Inter /.../R021883); BEST Arabidopsis thaliana protein match is- tetratricopeptide repeat (TPR)-containing protein (TAIR-AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (322 aa)
     
        0.861
Solyc07g045420.2.1
Protein kinase superfamily protein (699 aa)
     
        0.850
101262576
annotation not available (423 aa)
           
  0.837
Solyc04g082920.2.1
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (218 aa)
     
        0.816
101257625
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (1054 aa)
           
  0.764
ACI13
ACI13 (259 aa)
           
  0.740
104646098
annotation not available (263 aa)
           
  0.740
101258959
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (301 aa)
     
 
  0.696
101255353
annotation not available (272 aa)
     
        0.656
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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