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DRM5 protein (Solanum lycopersicum) - STRING interaction network
"DRM5" - Putative DNA cytosine 5-methyltransferase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRM5Putative DNA cytosine 5-methyltransferase (603 aa)    
Predicted Functional Partners:
MET
Cytosine-specific methyltransferase (1559 aa)
       
  0.726
Solyc10g081720.1.1
Uncharacterized protein (449 aa)
       
      0.624
Solyc06g082160.2.1
SAGA-associated factor 11 (336 aa)
       
      0.624
SUS1
Transcription and mRNA export factor SUS1 ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (71 aa)
       
      0.624
Solyc02g089970.2.1
Uncharacterized protein (1509 aa)
     
  0.610
Solyc08g068810.2.1
Uncharacterized protein (549 aa)
     
      0.597
Solyc08g061830.1.1
Uncharacterized protein (179 aa)
     
      0.597
Solyc07g007640.1.1
Uncharacterized protein (237 aa)
     
      0.597
Solyc02g094520.2.1
Uncharacterized protein (677 aa)
     
  0.593
Solyc01g109970.2.1
Uncharacterized protein (907 aa)
     
  0.576
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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