• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101252250 protein (Solanum lycopersicum) - STRING interaction network
"101252250" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252250annotation not available (166 aa)    
Predicted Functional Partners:
Solyc03g096890.1.1
Protein kinase family protein with ARM repeat domain (1134 aa)
           
  0.642
101250094
Uncharacterized protein; Low psii accumulation2 (186 aa)
           
  0.631
100037732
Uricase; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin; Belongs to the uricase family (307 aa)
           
  0.627
101250576
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner (729 aa)
           
  0.626
101263536
G-protein-coupled receptor 1 (322 aa)
           
  0.582
101245190
Protein of unknown function (DUF567) (231 aa)
           
  0.576
Solyc09g008830.2.1
Uncharacterized protein; Sequence-specific DNA binding transcription factors (236 aa)
           
  0.446
101255357
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (222 aa)
           
  0.437
101244916
annotation not available (179 aa)
           
  0.412
Solyc03g058460.1.1
annotation not available (94 aa)
           
  0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]