STRINGSTRING
Solyc02g064800.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g064800.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g064800.2.1Uncharacterized protein (774 aa)    
Predicted Functional Partners:
Solyc02g068340.2.1
Uncharacterized protein (1265 aa)
     
  0.895
Solyc06g053630.2.1
Serine/threonine-protein phosphatase (322 aa)
       
 
  0.872
Solyc06g030490.2.1
Serine/threonine-protein phosphatase (304 aa)
       
 
  0.872
Solyc05g055060.2.1
Serine/threonine-protein phosphatase (325 aa)
       
 
  0.872
Solyc09g011060.2.1
Clade IV lectin receptor kinase (832 aa)
     
  0.830
Solyc01g098980.2.1
Uncharacterized protein (1618 aa)
     
  0.788
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
       
  0.742
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
       
  0.742
Solyc11g071920.1.1
Serine/threonine-protein phosphatase (995 aa)
     
 
  0.739
BSL1
Hop-interacting protein THI129 (845 aa)
     
 
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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