STRINGSTRING
Solyc02g065160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g065160.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g065160.1.1annotation not available (285 aa)    
Predicted Functional Partners:
101249807
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (285 aa)
     
 
  0.663
101251156
annotation not available (316 aa)
     
 
  0.663
101265586
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (462 aa)
     
 
  0.663
Solyc00g009040.2.1
annotation not available (649 aa)
           
  0.548
Solyc11g013430.1.1
annotation not available (150 aa)
     
 
  0.508
Solyc11g013410.1.1
annotation not available (94 aa)
     
 
  0.508
Solyc11g013400.1.1
annotation not available (209 aa)
     
 
  0.508
101264940
Uncharacterized protein; SWITCH/sucrose nonfermenting 3C (791 aa)
     
 
  0.478
101268100
Uncharacterized protein; Switch subunit 3 (489 aa)
     
 
  0.478
101250780
Uncharacterized protein; SWITCH/sucrose nonfermenting 3A (573 aa)
     
 
  0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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