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STRINGSTRING
101263274 protein (Solanum lycopersicum) - STRING interaction network
"101263274" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101263274annotation not available (217 aa)    
Predicted Functional Partners:
101244264
annotation not available (604 aa)
     
  0.986
101247744
annotation not available (711 aa)
     
  0.985
101251393
Uncharacterized protein; INVOLVED IN- autophagy; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Autophagy-related protein 17 (InterPro-IPR007240), Autophagy-related protein 11 (InterPro-IPR019460); Has 8793 Blast hits to 6 /.../oteins in 570 species- Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source- NCBI BLink) (1155 aa)
     
 
  0.966
101268335
Protein kinase family protein; Belongs to the protein kinase superfamily (280 aa)
     
 
  0.945
Solyc06g072980.2.1
annotation not available (564 aa)
     
 
  0.936
101265495
annotation not available (717 aa)
     
 
  0.932
Solyc03g111740.2.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (482 aa)
     
 
  0.911
Solyc06g043140.2.1
Autophagy protein 5; Required for autophagy (340 aa)
     
 
  0.880
Solyc02g036380.2.1
Autophagy protein 5; Required for autophagy (418 aa)
     
 
  0.880
101246793
ThiF family protein (715 aa)
     
   
  0.853
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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