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101257632 protein (Solanum lycopersicum) - STRING interaction network
"101257632" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257632Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (653 aa)    
Predicted Functional Partners:
101262330
Uncharacterized protein; Polynucleotidyl transferase, ribonuclease H-like superfamily protein (317 aa)
           
  0.851
101268862
annotation not available (679 aa)
           
  0.851
101249532
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein; Belongs to the adenylate kinase family (237 aa)
           
  0.851
Solyc03g007100.2.1
Uncharacterized protein; Cleavage and polyadenylation specificity factor 160 (1425 aa)
     
   
  0.574
101246369
annotation not available (355 aa)
           
  0.573
101252961
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner (660 aa)
           
  0.573
101243842
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Splicing factor, suppressor of white apricot (InterPro-IPR019147); /.../72 Blast hits to 5479 proteins in 321 species- Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source- NCBI BLink) (561 aa)
           
  0.572
101266585
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (223 aa)
     
   
  0.567
101245800
Uncharacterized protein; Homolog of yeast sucrose nonfermenting 4 (483 aa)
           
  0.563
Solyc01g067590.2.1
annotation not available (482 aa)
           
  0.563
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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