STRINGSTRING
Solyc02g067540.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g067540.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g067540.2.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc02g077280.2.1
Uncharacterized protein (438 aa)
   
   
  0.547
Solyc02g071280.2.1
Uncharacterized protein (654 aa)
   
   
  0.532
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
   
        0.478
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
              0.461
Solyc11g008360.1.1
Uncharacterized protein (414 aa)
   
        0.456
Solyc07g066460.2.1
Uncharacterized protein (233 aa)
   
   
  0.429
Solyc12g021340.1.1
Uncharacterized protein (237 aa)
     
   
  0.403
Solyc01g091580.2.1
Uncharacterized protein (368 aa)
   
   
  0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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