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STRINGSTRING
Solyc02g067730.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g067730.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g067730.1.1annotation not available (344 aa)    
Predicted Functional Partners:
101249211
PETER PAN-like protein (345 aa)
     
 
  0.922
101253680
annotation not available (493 aa)
     
   
  0.917
101263645
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (1012 aa)
     
      0.910
101259142
annotation not available (312 aa)
     
   
  0.887
101263184
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
      0.875
101257100
MAK16 protein-related; Belongs to the MAK16 family (302 aa)
     
      0.873
101265348
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- rRNA processing; LOCATED IN- preribosome, small subunit precursor; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nucleolar, Nop52 (InterPro-I /.../01); Has 543 Blast hits to 530 proteins in 201 species- Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source- NCBI BLink) (589 aa)
     
      0.869
101266558
Uncharacterized protein; Pumilio 24 (620 aa)
     
      0.868
101262065
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (275 aa)
     
      0.865
DEAD30
RNA helicase 36; Belongs to the DEAD box helicase family (488 aa)
   
 
  0.862
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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