STRINGSTRING
Solyc02g067810.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g067810.1.1" - EXG1 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g067810.1.1EXG1 (104 aa)    
Predicted Functional Partners:
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
       
      0.966
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
       
      0.937
cycD3
CycD3;1 protein; Cyclin D3.1 (359 aa)
       
      0.916
Solyc08g041890.2.1
Importin subunit alpha (577 aa)
       
      0.902
Solyc01g060470.2.1
Importin subunit alpha (530 aa)
       
      0.902
KAP
Importin subunit alpha ; Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Promotes docking of import substrates to the nuclear envelope. Seems to act as a cytosolic receptor for both simple and bipartite NLS motifs (By similarity) (527 aa)
       
      0.901
Solyc05g051410.2.1
Uncharacterized protein (344 aa)
       
      0.900
Solyc04g076040.2.1
Uncharacterized protein (355 aa)
       
      0.900
Solyc11g008720.1.1
Beta-glucosidase (504 aa)
           
  0.699
Solyc10g084270.1.1
Importin subunit alpha (520 aa)
       
      0.605
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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