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STRINGSTRING
Solyc02g067990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g067990.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g067990.2.1annotation not available (733 aa)    
Predicted Functional Partners:
101257536
Unknown protein; Has 109 Blast hits to 109 proteins in 44 species- Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (427 aa)
           
  0.851
101268527
annotation not available (305 aa)
           
  0.851
101260906
Unknown protein; Has 474 Blast hits to 433 proteins in 138 species- Archae - 6; Bacteria - 80; Metazoa - 195; Fungi - 44; Plants - 59; Viruses - 0; Other Eukaryotes - 90 (source- NCBI BLink) (801 aa)
           
  0.851
Solyc08g013990.2.1
Unknown protein; Has 158 Blast hits to 154 proteins in 73 species- Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source- NCBI BLink) (289 aa)
           
  0.837
NMP1
Nuclear matrix protein 1 (331 aa)
           
  0.780
101250937
annotation not available (587 aa)
           
  0.763
Solyc06g083100.1.1
annotation not available (597 aa)
           
  0.745
101256301
annotation not available (615 aa)
           
  0.745
Solyc11g062010.1.1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (2667 aa)
     
   
  0.458
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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