STRINGSTRING
Solyc02g068180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g068180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g068180.2.1Uncharacterized protein (274 aa)    
Predicted Functional Partners:
Solyc01g080300.2.1
Uncharacterized protein (385 aa)
 
  0.971
Solyc06g068600.2.1
Uncharacterized protein (185 aa)
   
     
  0.545
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
         
  0.484
Solyc03g046340.2.1
Uncharacterized protein (656 aa)
   
     
  0.476
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
           
  0.459
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
         
  0.454
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
         
  0.447
ftsH6
FtsH protease (672 aa)
   
     
  0.438
Solyc01g080840.2.1
Protein translocase subunit SecA (1018 aa)
   
     
  0.421
Solyc06g071980.2.1
Uncharacterized protein (760 aa)
   
          0.418
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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