STRINGSTRING
TCP18 protein (Solanum lycopersicum) - STRING interaction network
"TCP18" - TCP transcription factor 18 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP18TCP transcription factor 18 (272 aa)    
Predicted Functional Partners:
Solyc01g049690.2.1
Uncharacterized protein (115 aa)
       
      0.612
Solyc01g049680.2.1
Uncharacterized protein (179 aa)
       
      0.612
Solyc12g036390.1.1
Uncharacterized protein (452 aa)
       
      0.604
Solyc12g011200.1.1
Uncharacterized protein (335 aa)
       
      0.604
Solyc07g056280.2.1
Uncharacterized protein (322 aa)
       
      0.604
Solyc03g119250.2.1
Uncharacterized protein (439 aa)
       
      0.604
GAI
DELLA protein GAI ; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination (588 aa)
       
      0.477
Solyc02g092780.1.1
Uncharacterized protein (1055 aa)
       
      0.475
JA2
Jasmonic acid 2 (349 aa)
       
      0.465
JA2L
JA2-like (356 aa)
       
      0.465
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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