STRINGSTRING
Solyc02g068340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g068340.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g068340.2.1Uncharacterized protein (1265 aa)    
Predicted Functional Partners:
Solyc10g009340.1.1
Uncharacterized protein (123 aa)
       
  0.973
Solyc03g111380.2.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
  0.952
Solyc10g006740.2.1
Uncharacterized protein (146 aa)
       
  0.943
Solyc10g006700.1.1
Uncharacterized protein (122 aa)
       
  0.943
Solyc10g006660.2.1
Uncharacterized protein (129 aa)
       
  0.943
Solyc07g063690.1.1
Uncharacterized protein (113 aa)
       
  0.943
Solyc07g053050.1.1
Uncharacterized protein (116 aa)
       
  0.943
Solyc04g026350.2.1
Uncharacterized protein (173 aa)
       
  0.943
Solyc03g006710.1.1
Uncharacterized protein (115 aa)
       
  0.943
Solyc02g090810.2.1
Uncharacterized protein (168 aa)
       
  0.943
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]