STRINGSTRING
Solyc02g068350.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g068350.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g068350.1.1Uncharacterized protein (312 aa)    
Predicted Functional Partners:
Solyc08g069030.2.1
Delta-aminolevulinic acid dehydratase (430 aa)
   
  0.960
LOC543967
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic (482 aa)
   
 
  0.772
Solyc07g066470.2.1
Uncharacterized protein (365 aa)
   
  0.769
Solyc01g106390.2.1
Glutamyl-tRNA reductase (552 aa)
     
 
  0.725
Solyc01g089840.2.1
Uncharacterized protein (131 aa)
     
 
  0.725
Solyc10g007320.2.1
Uroporphyrinogen decarboxylase (420 aa)
   
 
  0.640
Solyc06g048730.2.1
Uroporphyrinogen decarboxylase (388 aa)
   
 
  0.640
Solyc01g086650.2.1
Uncharacterized protein (376 aa)
   
 
  0.631
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
           
  0.526
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
         
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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