STRINGSTRING
Solyc02g068700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g068700.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g068700.2.1Uncharacterized protein (180 aa)    
Predicted Functional Partners:
Solyc08g007380.2.1
Uncharacterized protein (151 aa)
   
     
  0.665
CIP3
Peptidyl-prolyl cis-trans isomerase (112 aa)
     
      0.656
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
 
  0.527
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
 
  0.527
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
 
  0.527
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
              0.521
Solyc10g085550.1.1
Enolase (444 aa)
   
 
  0.513
Solyc10g045050.1.1
Uncharacterized protein (107 aa)
   
 
  0.513
PGH1
Enolase (444 aa)
   
 
  0.513
Solyc06g076650.2.1
Uncharacterized protein (473 aa)
   
 
  0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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