STRINGSTRING
LOC544234 protein (Solanum lycopersicum) - STRING interaction network
"LOC544234" - Lecithine cholesterol acyltransferase-like protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC544234Lecithine cholesterol acyltransferase-like protein (535 aa)    
Predicted Functional Partners:
Solyc02g068240.2.1
Uncharacterized protein (333 aa)
     
 
  0.583
Solyc12g008970.1.1
O-acyltransferase (463 aa)
       
 
  0.549
Solyc07g040740.2.1
O-acyltransferase (514 aa)
       
 
  0.549
Solyc10g079410.1.1
Uncharacterized protein (826 aa)
     
   
  0.493
Solyc10g079770.1.1
Uncharacterized protein (445 aa)
     
   
  0.470
Solyc10g084540.1.1
Uncharacterized protein (1563 aa)
       
 
  0.446
Solyc12g056420.1.1
Uncharacterized protein (459 aa)
           
  0.445
Solyc08g080340.2.1
Uncharacterized protein (463 aa)
           
  0.445
Solyc08g007860.2.1
Uncharacterized protein (463 aa)
           
  0.445
Solyc09g018510.2.1
Uncharacterized protein (293 aa)
       
 
  0.430
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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