STRINGSTRING
Solyc02g069170.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g069170.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g069170.1.1Uncharacterized protein (280 aa)    
Predicted Functional Partners:
Solyc12g096470.1.1
Uncharacterized protein (138 aa)
       
  0.988
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
       
  0.984
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
       
  0.981
Solyc06g036200.1.1
Uncharacterized protein (129 aa)
       
  0.974
Solyc02g078300.2.1
Uncharacterized protein (128 aa)
       
  0.974
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
  0.964
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
       
  0.963
Solyc06g062900.2.1
Uncharacterized protein (240 aa)
       
  0.963
Solyc03g122020.2.1
Uncharacterized protein (642 aa)
       
  0.963
Solyc04g077290.1.1
Uncharacterized protein (274 aa)
       
 
  0.906
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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