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LOC543598 protein (Solanum lycopersicum) - STRING interaction network
"LOC543598" - Iron-regulated transporter 2 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543598Iron-regulated transporter 2 (352 aa)    
Predicted Functional Partners:
NRAMP1
Root-specific metal transporter (530 aa)
           
  0.912
NRAMP3
Metal transporter (509 aa)
           
  0.858
Solyc11g062020.1.1
Uncharacterized protein (276 aa)
       
 
  0.729
Solyc01g087530.2.1
Uncharacterized protein (595 aa)
       
 
  0.729
FRO1
Ferric-chelate reductase (719 aa)
           
  0.700
fer
BHLH transcriptional regulator (304 aa)
           
  0.699
Solyc04g008340.2.1
Uncharacterized protein (489 aa)
       
 
  0.595
Solyc04g081750.2.1
Uncharacterized protein (563 aa)
       
      0.505
Solyc03g063320.2.1
Uncharacterized protein (387 aa)
     
   
  0.474
Solyc02g067620.1.1
Uncharacterized protein (902 aa)
     
   
  0.474
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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