STRINGSTRING
AGO3 protein (Solanum lycopersicum) - STRING interaction network
"AGO3" - Argonaute 3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGO3Argonaute 3 (999 aa)    
Predicted Functional Partners:
DCL1
Endoribonuclease Dicer homolog 1 (1888 aa)
     
  0.992
Solyc11g008520.1.1
Uncharacterized protein (1428 aa)
     
  0.976
Solyc07g005030.2.1
Uncharacterized protein (1536 aa)
     
  0.976
Solyc06g048960.2.1
Uncharacterized protein (1399 aa)
     
  0.976
DCL3
Endoribonuclease Dicer homolog 3a (1430 aa)
     
  0.932
Solyc07g048120.2.1
Uncharacterized protein (569 aa)
     
  0.857
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
       
 
  0.856
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
       
 
  0.856
RPE1
DNA-directed RNA polymerase V subunit 1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
     
  0.856
Solyc12g014410.1.1
Uncharacterized protein (391 aa)
     
  0.855
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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